Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801684.1_cds_XP_016476490.1_6802
CDS Infomation

[gene=LOC107798060] [db_xref=GeneID:107798060] [protein=jasmonic acid-amido synthetase JAR1-like] [protein_id=XP_016476490.1] [location=join(33722..33870,34290..35083,35300..35841)] [gbkey=CDS]
Sequence

ATGTTTTTAGAAGGTTTGAATAAGGAAATTGAATGGTTGGTTTGCAGTTCTGGTACTACT
CAAGGGAAGCCAAAGTTTGTACCTTTCAATGATGAATTGATGGAGTCCACTATGCAGATA
TTCAAGACCTCTTTTGCCTTTAGGAATCGAGAATTTCCAATTGGAAATGGGAAGGCTTTG
CAGTTTATTTACAGCAGCAAACAGTTCAAAACAAAGGGAGGTTTAGCAGCAGGAACAGCC
ACTACCAATGTGTACAGAAATGCACAATTCAAGAAGACAATGAAAACAATGTGTACTCCA
TGTTGTAGTCCTGATGAAGTAATATTTGGTCCTGATTTTCACCAATCCTTATACTGCCAC
CTTTTGTGTGGGCTCATTTTCCGCGATGAAGTTCAAGTTGTTTCGTCAACCTTTGCCCAT
AGCATTGTTCATGCTTTCCGAACTTTTGAACAAGTATGGGAAGCACTTGTTGTTGACATA
AGAGAAGGAGTCCTGTCGAGTAGAGTCACTGTCCCGTCCATAGGATTAGCCATGTCAAAA
TTGCTGAAGTCTGATCCAGAACTAGCTGATACAATTTATAATAAGTGCTCAAGATTAAGC
AATTGGTACGGTTTGATTCCTGAACTCTTCCCAAACACAAGGTACATATATGGTATAATG
ACAGGATCAATGGAACCTTACTTGAAGAAACTGAGGCATTATGCTGGGGAGTTACCTTTA
TTAAGTGCAGATTATGGTTCTTCTGAAGGATGGGTTGGAGTAAACGTTAACCCGAAATTG
CCCCCTGAACTAGTCACTTACGCAGTACTACCAAATATTGCTTATTTCGAATTCATTCCT
CTCGGGAGAAATCTCAATGGCATGGAGCAAGCAAATTCTCCTGTGGGTCTGACTGAAGTT
AAACTTGGTGAAGAGTATGAAATTGTCTTTACCAATTTTGCAGGTTTATATCGTTATAGA
CTAGGTGATGTGGTAAAGATAAAAGACTTCCACAATGGGACTCCAGAACTCCAGTTTGTA
TGCAGAAGGAACCTTTTGCTGAGCATTAACATTGACAAGAACACAGAGAGAGATTTACAA
CTAGCCGTAGAAGCTGCAGCAAAGCGCTTAGTAGACGGAAAACTAGAAGTGGTGGACTTC
ACGAGCCATGTCAATGTCTCGGCTGATCCGGGACACTATGTGATCTTTTGGGAACTGAGT
GGTGAAGCAAATGGTGAAATGTTGCAAGATTGCTGCAACTGTTTGGATAAGGCGTTTATC
GATGCAGGCTATATGAGCTCCCGGAAAGTGAATGCAATTGGAGCACTTGAGCTGAGGATT
GTGAAGAGGGGAACATTTCATAAGATATTAGATCATTTTGTAGGATTAGGAGGTGCAGTT
AGCCAGTTCAAAACTCCTAGATGTGTTGGTCCAAAGAATAGCTCATTGCTCCAAATATTG
TCTAGTAATGTTGTTGAGAGCTATGTTAGTACTGCCTTCTGTTGA

Peptide Sequence

PEP ID

XP_016476490.1
PEP Infomation

PREDICTED: jasmonic acid-amido synthetase JAR1-like [Nicotiana tabacum]
Sequence

MFLEGLNKEIEWLVCSSGTTQGKPKFVPFNDELMESTMQIFKTSFAFRNREFPIGNGKAL
QFIYSSKQFKTKGGLAAGTATTNVYRNAQFKKTMKTMCTPCCSPDEVIFGPDFHQSLYCH
LLCGLIFRDEVQVVSSTFAHSIVHAFRTFEQVWEALVVDIREGVLSSRVTVPSIGLAMSK
LLKSDPELADTIYNKCSRLSNWYGLIPELFPNTRYIYGIMTGSMEPYLKKLRHYAGELPL
LSADYGSSEGWVGVNVNPKLPPELVTYAVLPNIAYFEFIPLGRNLNGMEQANSPVGLTEV
KLGEEYEIVFTNFAGLYRYRLGDVVKIKDFHNGTPELQFVCRRNLLLSINIDKNTERDLQ
LAVEAAAKRLVDGKLEVVDFTSHVNVSADPGHYVIFWELSGEANGEMLQDCCNCLDKAFI
DAGYMSSRKVNAIGALELRIVKRGTFHKILDHFVGLGGAVSQFKTPRCVGPKNSSLLQIL
SSNVVESYVSTAFC

Transcript Sequence

Gene sequence data has not been registered.